PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10435231g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 327aa    MW: 34837.4 Da    PI: 6.717
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10435231g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.5e-11154196754
                       HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++ErrRR+++N+++  Lr+++Pk       K++ ++iL  A eY+++L
  MA_10435231g0010 154 MAERRRRKKLNDRLLMLRSVVPKV-----SKMDRSSILGDAAEYLQEL 196
                       79*********************6.....5***************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.494147196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.03E-15150213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.4E-13153202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.2E-9153196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.60E-11154200No hitNo description
Gene3DG3DSA:4.10.280.101.1E-13154207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048736.22E-6257316No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MEMEMAWTGL LDKNFSSLRA MLDGGGEDGF YATMDANGWT LEALLGSSLS SPGGSVLSNV  60
GGSINASHHL SCSMSTSVHT LEGPGGSDQL GLLHRRDVIE SGIHKNGGNQ KPNGGVGERG  120
ADSVVAVDSN NNKYVNAANA GRGKKNGLPA KNLMAERRRR KKLNDRLLML RSVVPKVSKM  180
DRSSILGDAA EYLQELLQRI GDLHTELTSG SCNSKPLADT LADFPCRLNG ELQASFSSTV  240
EPAKVEVRSR EGKSLHINMF CSEKPGLLLS TIRALDELGL DVKQAVISCL NGFALDVLQE  300
KQSMGGDVTA EEIKTLLLHT AGYQAGL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155162ERRRRKKL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016563066.13e-71PREDICTED: transcription factor ICE1
RefseqXP_016563067.13e-71PREDICTED: transcription factor ICE1
SwissprotQ9LPW37e-67SCRM2_ARATH; Transcription factor SCREAM2
TrEMBLD5A9342e-90D5A934_PICSI; Putative uncharacterized protein
STRINGGSMUA_Achr6P08070_0019e-71(Musa acuminata)
STRINGBra016749.1-P5e-69(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5571678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12860.18e-55bHLH family protein